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{{alert|This page is under review|alert-under-review}}
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[[File:General information page image.png|left|100px|alt=image]]
  
[[File:Bacteria impairments.jpg|300px|thumb|alt=image of bacteria impairments|<font size=3>Map showing 2016 U.S. EPA-approved stream and river stretches impaired for either e coli or fecal coliforms.</font size>]]
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[[File:Bacteria impairments.jpg|300px|thumb|alt=image of bacteria impairments|<font size=3>Map showing 2018 U.S. EPA-approved stream and river stretches impaired for either e coli or fecal coliforms.</font size>]]
  
''Escherichia (E). coli''  is an indicator bacteria, meaning it indicates the potential presence of disease causing <span title="a microbe or microorganism such as a virus, bacterium, prion, or fungus that causes disease in humans."> '''pathogens'''</span> that can be harmful to human health. Currently there are 139 <span title="the amount of a pollutant from both point and nonpoint sources that a waterbody can receive and still meet water quality standards"> [https://stormwater.pca.state.mn.us/index.php?title=Total_Maximum_Daily_Loads_(TMDLs) '''total maximum daily load''']</span> (TMDLs) that include <span title="A municipal separate storm sewer system (MS4) is a means of transportation, individually or in a system, (e.g. roads with drainage systems, municipal streets, catch basins, curbs, gutters, ditches, man-made channels, storm drains, etc.) that are: owned or operated by a public entity (e.g. cities, townships, counties, military bases, hospitals, prison complexes, highway departments, universities, etc.) with jurisdiction over disposal of sewage, industrial wastes, stormwater, or other wastes. This includes special districts under State law (sewer, flood control, or drainage districts, etc.), an authorized Indian tribal organization, or a designated and approved management agency under section 208 of the Clean Water Act; designed or used for collecting or transporting stormwater; not a combined sewer; and not part of a publicly owned treatment works."> '''MS4'''</span> (Municipal Separate Storm Sewer System)<span title="the portion of a receiving water's assimilative capacity that is allocated to one of its existing or future point sources of pollution"> '''wasteload allocations'''</span> (WLAs) for bacteria. [https://www.pca.state.mn.us/water/minnesotas-impaired-waters-list Click here] to link to MPCA's impaired waters website. The adjoining map illustrates U.S. EPA-approved listings for ''E. coli'' and fecal coliform.  
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This page provides guidance for <span title="A municipal separate storm sewer system (MS4) is a means of transportation, individually or in a system, (e.g. roads with drainage systems, municipal streets, catch basins, curbs, gutters, ditches, man-made channels, storm drains, etc.) that are: owned or operated by a public entity (e.g. cities, townships, counties, military bases, hospitals, prison complexes, highway departments, universities, etc.) with jurisdiction over disposal of sewage, industrial wastes, stormwater, or other wastes. This includes special districts under State law (sewer, flood control, or drainage districts, etc.), an authorized Indian tribal organization, or a designated and approved management agency under section 208 of the Clean Water Act; designed or used for collecting or transporting stormwater; not a combined sewer; and not part of a publicly owned treatment works."> '''MS4'''</span> (Municipal Separate Storm Sewer System) permittees who have <span title="the amount of a pollutant from both point and nonpoint sources that a waterbody can receive and still meet water quality standards"> [https://stormwater.pca.state.mn.us/index.php?title=Total_Maximum_Daily_Loads_(TMDLs) '''total maximum daily load''']</span> (TMDLs) <span title="the portion of a receiving water's assimilative capacity that is allocated to one of its existing or future point sources of pollution"> '''wasteload allocations'''</span> (WLAs) for bacteria.
  
The MS4 permit requires permittees that have an applicable wasteload allocation (WLA) for bacteria to
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For more information on bacteria in stormwater, [https://stormwater.pca.state.mn.us/index.php?title=Bacteria_in_stormwater link here]. For more information on pathogens in urban stormwater [http://www.asce-pgh.org/Resources/EWRI/Pathogens%20Paper%20August%202014.pdf link here].
#maintain a written or mapped inventory of potential areas and sources of bacteria (e.g., dense populations of waterfowl or other birds, dog parks) ([https://stormwater.pca.state.mn.us/index.php?title=File:Draft_MS4_Permit_(5.7.2019).pdf Draft permit requirement 18.14]), and
 
#maintain a written plan to prioritize reduction activities to address the areas (Draft permit requirement 18.15).
 
  
[http://www.asce-pgh.org/Resources/EWRI/Pathogens%20Paper%20August%202014.pdf Suggested reading for more information on pathogens in urban stormwater]
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==Bacteria TMDLs==
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''Escherichia (E). coli''  is an indicator bacteria, meaning it indicates the potential presence of disease causing <span title="a microbe or microorganism such as a virus, bacterium, prion, or fungus that causes disease in humans."> '''pathogens'''</span> that can be harmful to human health. Currently there are 172 impaired waters that have <span title="the amount of a pollutant from both point and nonpoint sources that a waterbody can receive and still meet water quality standards"> [https://stormwater.pca.state.mn.us/index.php?title=Total_Maximum_Daily_Loads_(TMDLs) '''total maximum daily load''']</span> (TMDLs) that include <span title="A municipal separate storm sewer system (MS4) is a means of transportation, individually or in a system, (e.g. roads with drainage systems, municipal streets, catch basins, curbs, gutters, ditches, man-made channels, storm drains, etc.) that are: owned or operated by a public entity (e.g. cities, townships, counties, military bases, hospitals, prison complexes, highway departments, universities, etc.) with jurisdiction over disposal of sewage, industrial wastes, stormwater, or other wastes. This includes special districts under State law (sewer, flood control, or drainage districts, etc.), an authorized Indian tribal organization, or a designated and approved management agency under section 208 of the Clean Water Act; designed or used for collecting or transporting stormwater; not a combined sewer; and not part of a publicly owned treatment works."> '''MS4'''</span> (Municipal Separate Storm Sewer System) <span title="the portion of a receiving water's assimilative capacity that is allocated to one of its existing or future point sources of pollution"> '''wasteload allocations'''</span> (WLAs) for bacteria. [https://www.pca.state.mn.us/water/minnesotas-impaired-waters-list Click here] to link to MPCA's impaired waters website. The adjoining map illustrates U.S. EPA-approved listings for ''E. coli'' and fecal coliform.
  
==Maintain a written or mapped inventory of potential areas and sources of bacteria==
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== Permit requirements for bacteria TMDLs==
The written or mapped inventory should identify potential areas and sources of bacteria. Common sources for bacteria include sanitary sewer overflow locations, areas that attract nuisance birds and/or wildlife (parks, golf courses, etc.), dog parks, and known septic systems (see adjoining table for additional potential sources).
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MS4 permit requirements for permittees that have an applicable wasteload allocation (WLA) for bacteria include the following:
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Section 22.3: If the permittee has an applicable WLA where a reduction in pollutant loading is required for bacteria, the permittee
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must maintain a written or mapped inventory of potential areas and sources of bacteria (e.g., dense populations of waterfowl or other bird, dog parks).
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Section 22.4: If the permittee has an applicable WLA where a reduction in pollutant loading is required for bacteria, the
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permittee must maintain a written plan to prioritize reduction activities to address the areas and sources identified in
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the inventory in item 22.3. The written plan must include BMPs the permittee will implement over the permit term, which may include,
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but is not limited to:<br>
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a. water quality monitoring to determine areas of high bacteria loading;<br>
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b. installation of pet waste pick-up bags in parks and open spaces;<br>
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c. elimination of over-spray irrigation that may occur at permittee owned/operated areas;<br>
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d. removal of organic matter via street sweeping;<br>
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e. implementation of infiltration structural stormwater BMPs; or<br>
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f. management of areas that attract dense populations of waterfowl (e.g., riparian plantings).
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{{alert|The MPCA, working with stakeholders, developed a [[Support document for Checklist for bacteria source inventory| checklist]] for conducting an inventory of bacteria sources. The checklist is not a permit requirement but may be used to meet permit requirements 22.3 and 22.4.|alert-info}}
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==Guidance for meeting bacteria TMDL permit requirements==
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The MS4 permit employs a performance based approach for meeting bacteria TMDLs. This means that permittees must perform certain actions intended to reduce bacteria loads from stormwater runoff rather than quantify loads or load reductions associated with implementation of <span title="one of many different structural or non–structural methods used to treat runoff"> '''best management practices'''</span> (BMPs).
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===Inventorying potential areas and sources of bacteria===
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'''Section 22.3''': ''If the permittee has an applicable WLA for bacteria, the permittee must maintain a written or mapped inventory of potential areas and sources of bacteria (e.g., dense populations of waterfowl or other bird, dog parks).''
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The purpose of this permit requirement is to identify areas that may contribute significant bacteria loads to stormwater runoff and receiving waters. Bacteria are ubiquitous and there are many potential sources in urban areas. Common sources for bacteria include sanitary sewer overflow locations, areas that attract nuisance birds and/or wildlife (parks, golf courses, etc.), dog parks, and known septic systems (see adjoining table for additional potential sources). The intention of this permit requirement is to identify areas where bacteria loading may be particularly high so that permittees can implement activities to reduce or eliminate the bacteria source.
  
 
The adjoining table and a section in the manual, [https://stormwater.pca.state.mn.us/index.php?title=Bacteria_in_stormwater#Stormwater_management_for_bacteria Stormwater management for bacteria], may be helpful in identifying areas for inventoring and mapping.
 
The adjoining table and a section in the manual, [https://stormwater.pca.state.mn.us/index.php?title=Bacteria_in_stormwater#Stormwater_management_for_bacteria Stormwater management for bacteria], may be helpful in identifying areas for inventoring and mapping.
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{{:Potential sources of bacteria and actions to address}}
 
{{:Potential sources of bacteria and actions to address}}
  
Information that can be used to identify potential sources of bacteria in the impaired watershed may already be available in the following.
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[[File:Vermillion TMDL Implementation Table.jpg|600px|thumb|alt=Vermillion TMDL Implemenation Table|<font size=3>Table from the Vermillion River Watershed TMDL report showing potential sources of bacteria in each impaired watershed. Click on image to enlarge.</font size>]]
*[https://www.pca.state.mn.us/water/total-maximum-daily-load-tmdl-projects TMDL Reports]
 
*TMDL <span title="a plan that specifies the type and quantity of corrective measures needed to achieve the pollutant loads calculated in a TMDL and implementing those plans will help to achieve that goal."> '''Implementation Plans'''</span>
 
*[https://www.pca.state.mn.us/featured/wraps-prescriptions-healthy-lakes-and-streams Watershed Restoration and Protection Strategies Reports]
 
*Local water plans (e.g., Watershed Management Organizations, Watershed Districts, Soil and Watershed Districts, Conservation Districts, County, City, and One Watershed One Plans)
 
*[https://www.health.state.mn.us/communities/environment/water/cwf/dwpcwf.html Source Water Protection Plans]
 
 
 
Many TMDL reports contain information on potential sources and relative contributions of sources in the TMDL impaired subwatershed. For example, the [https://www.pca.state.mn.us/sites/default/files/wq-iw9-16e.pdf Vermillion River Watershed TMDL Report] (2015) includes the table below which shows potential sources of bacteria in each impaired reach.
 
 
 
[[File:Vermillion TMDL Implementation Table.jpg|600thumb|alt=Vermillion TMDL Implementation Table|<font size=3></font size>]]
 
  
 
[[File:Bacteria map 1.png|300px|thumb|alt=Bacteria map|<font size=3>Map showing potential sources of bacteria in an impaired watershed.]]</font size>
 
[[File:Bacteria map 1.png|300px|thumb|alt=Bacteria map|<font size=3>Map showing potential sources of bacteria in an impaired watershed.]]</font size>
  
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Many TMDL reports contain information on potential sources and relative contributions of sources in the TMDL impaired subwatershed. For example, the [https://www.pca.state.mn.us/sites/default/files/wq-iw9-16e.pdf Vermillion River Watershed TMDL Report] (2015) includes the adjoining table that shows potential sources of bacteria in each impaired reach. These reports may provide specific sources to the impaired water, although most TMDL reports provide general information about bacteria sources.
  
 
You may also choose to create a mapped, rather than written, inventory of potential sources of bacteria. This could be done using <span title="A geographic information system (GIS) is a framework for gathering, managing, and analyzing data. It analyzes spatial location and organizes layers of information into visualizations using maps and 3D scenes."> '''Geographic Information System (GIS)'''</span> to show areas where there may be potentially high levels of bacteria. A hypothetical example is shown in the adjacent image. Note that the map shows the subwatershed area of the impaired reach outlined in blue and the jurisdictional boundary outlined in black. The sources indicated on the map include <span title="a system that treats wastewater for one specific residence. Wastewater includes all bathroom, kitchen, and laundry water."> '''subsurface sewage treatment system (SSTS)'''</span>, <span title="an underground pipe or tunnel system for transporting sewage from houses and commercial buildings (but not stormwater) to treatment facilities or disposal."> '''sanitary sewers'''</span>, and dog parks. In this hypothetical example the <span title="A municipal separate storm sewer system (MS4) is a means of transportation, individually or in a system, (e.g. roads with drainage systems, municipal streets, catch basins, curbs, gutters, ditches, man-made channels, storm drains, etc.) that are: owned or operated by a public entity (e.g. cities, townships, counties, military bases, hospitals, prison complexes, highway departments, universities, etc.) with jurisdiction over disposal of sewage, industrial wastes, stormwater, or other wastes. This includes special districts under State law (sewer, flood control, or drainage districts, etc.), an authorized Indian tribal organization, or a designated and approved management agency under section 208 of the Clean Water Act; designed or used for collecting or transporting stormwater; not a combined sewer; and not part of a publicly owned treatment works."> '''MS4 permittee'''</span> (Municipal Separate Storm Sewer System) may choose to focus their initial implementation efforts on working with residents to update any non-compliant septic systems, detecting and eliminating any <span title="any flow or dumping to a municipal separate storm sewer of any substance that is not composed entirely of stormwater; exceptions are non-stormwater discharges allowed by the NPDES Permit and discharges resulting from emergency firefighting activities."> '''illicit discharges'''</span> from sanitary sewers, and implementing an education campaign focused on dog park users.
 
You may also choose to create a mapped, rather than written, inventory of potential sources of bacteria. This could be done using <span title="A geographic information system (GIS) is a framework for gathering, managing, and analyzing data. It analyzes spatial location and organizes layers of information into visualizations using maps and 3D scenes."> '''Geographic Information System (GIS)'''</span> to show areas where there may be potentially high levels of bacteria. A hypothetical example is shown in the adjacent image. Note that the map shows the subwatershed area of the impaired reach outlined in blue and the jurisdictional boundary outlined in black. The sources indicated on the map include <span title="a system that treats wastewater for one specific residence. Wastewater includes all bathroom, kitchen, and laundry water."> '''subsurface sewage treatment system (SSTS)'''</span>, <span title="an underground pipe or tunnel system for transporting sewage from houses and commercial buildings (but not stormwater) to treatment facilities or disposal."> '''sanitary sewers'''</span>, and dog parks. In this hypothetical example the <span title="A municipal separate storm sewer system (MS4) is a means of transportation, individually or in a system, (e.g. roads with drainage systems, municipal streets, catch basins, curbs, gutters, ditches, man-made channels, storm drains, etc.) that are: owned or operated by a public entity (e.g. cities, townships, counties, military bases, hospitals, prison complexes, highway departments, universities, etc.) with jurisdiction over disposal of sewage, industrial wastes, stormwater, or other wastes. This includes special districts under State law (sewer, flood control, or drainage districts, etc.), an authorized Indian tribal organization, or a designated and approved management agency under section 208 of the Clean Water Act; designed or used for collecting or transporting stormwater; not a combined sewer; and not part of a publicly owned treatment works."> '''MS4 permittee'''</span> (Municipal Separate Storm Sewer System) may choose to focus their initial implementation efforts on working with residents to update any non-compliant septic systems, detecting and eliminating any <span title="any flow or dumping to a municipal separate storm sewer of any substance that is not composed entirely of stormwater; exceptions are non-stormwater discharges allowed by the NPDES Permit and discharges resulting from emergency firefighting activities."> '''illicit discharges'''</span> from sanitary sewers, and implementing an education campaign focused on dog park users.
  
You may also want to consider further activities to determine potential sources of bacteria. Some voluntary activities could include the following.
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You may also want to consider further activities to determine potential sources of bacteria. Some voluntary activities may include the following.
 
:# Conduct an E. coli monitoring study along the impaired stream to help identify hot spots of higher bacteria concentrations. Monitor the tributaries flowing into the stream and consider monitoring stormwater outfalls. Sampling at the correct times is critical if this approach is utilized. See [https://stormwater.pca.state.mn.us/index.php?title=Recommendations_and_guidance_for_utilizing_stream_monitoring_to_meet_TMDL_permit_requirements#Bacteria_.28E._coli.29 bacteria monitoring guidance] for more information.
 
:# Conduct an E. coli monitoring study along the impaired stream to help identify hot spots of higher bacteria concentrations. Monitor the tributaries flowing into the stream and consider monitoring stormwater outfalls. Sampling at the correct times is critical if this approach is utilized. See [https://stormwater.pca.state.mn.us/index.php?title=Recommendations_and_guidance_for_utilizing_stream_monitoring_to_meet_TMDL_permit_requirements#Bacteria_.28E._coli.29 bacteria monitoring guidance] for more information.
:# Identify subwatersheds for each stormwater <span title="An outfall is defined as any point where a separate storm sewer system discharges to either Water of the United States or to another MS4. Outfalls include discharges from pipes, ditches swales, and other points of concentrated flow"> '''outfall'''</span> or tributary to the impaired stream, making note of potential high-loading features within these such as wildlife congregation areas, parks (especially dog parks) and sanitary systems that are potentially located upstream of stormwater systems. [https://stormwater.pca.state.mn.us/index.php?title=Recommendations_and_guidance_for_utilizing_major_stormwater_outfall_monitoring_to_meet_TMDL_permit_requirements Stormwater outfall monitoring] could be targeted based on the results from the written and/or mapped inventory.  
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:# Identify subwatersheds for each stormwater <span title="An outfall is defined as any point where a separate storm sewer system discharges to either Water of the United States or to another MS4. Outfalls include discharges from pipes, ditches swales, and other points of concentrated flow"> '''outfall'''</span> or tributary to the impaired stream, making note of potential high-loading features such as wildlife congregation areas, parks (especially dog parks) and sanitary systems that are potentially located upstream of stormwater systems. [https://stormwater.pca.state.mn.us/index.php?title=Recommendations_and_guidance_for_utilizing_major_stormwater_outfall_monitoring_to_meet_TMDL_permit_requirements Stormwater outfall monitoring] could be targeted based on the results from the written and/or mapped inventory.  
 
:# Visually inspect stormwater outfalls to the impaired stream during <span title="Dry weather flows represent all flows within the sewer pipes on a typical day without precipitation and the results of lower flow to separate sanitary sewer systems."> '''dry weather flow'''</span> for flows, odor, color, condition, etc. that would be indicative of an illicit discharge. Take the appropriate actions to eliminate the illicit discharge.
 
:# Visually inspect stormwater outfalls to the impaired stream during <span title="Dry weather flows represent all flows within the sewer pipes on a typical day without precipitation and the results of lower flow to separate sanitary sewer systems."> '''dry weather flow'''</span> for flows, odor, color, condition, etc. that would be indicative of an illicit discharge. Take the appropriate actions to eliminate the illicit discharge.
  
==Maintain a written plan to prioritize reduction activities==
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===Maintain a written plan to prioritize reduction activities===
MS4s with a bacteria WLA are required to create and maintain a written plan to prioritize reduction activities to address bacteria ([https://stormwater.pca.state.mn.us/index.php?title=File:Draft_MS4_Permit_(5.7.2019).pdf Section 18.14 of the draft MS4 permit]. Potential sources of bacteria and potential activities to address each source [https://stormwater.pca.state.mn.us/index.php?title=Guidance_for_meeting_bacteria_TMDL_MS4_permit_requirements#Maintain_a_written_or_mapped_inventory_of_potential_areas_and_sources_of_bacteria were discussed above].  
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'''Section 22.4''': ''If the permittee has an applicable WLA for bacteria, the permittee must maintain a written plan to prioritize reduction activities to address the areas and sources identified in the inventory in item 22.3. The written plan must include BMPs the permittee will implement over the permit term, which may include, but is not limited to'':<br>
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''a. water quality monitoring to determine areas of high bacteria loading;''<br>
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''b. installation of pet waste pick-up bags in parks and open spaces;''<br>
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''c. elimination of over-spray irrigation that may occur at permittee owned/operated areas;''<br>
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''d. removal of organic matter via street sweeping;''<br>
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''e. implementation of infiltration structural stormwater BMPs; or''<br>
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''f. management of areas that attract dense populations of waterfowl (e.g., riparian plantings)''.
 +
 
 +
MS4s with a bacteria WLA are required to develop and maintain a written plan to prioritize reduction activities to address bacteria. Potential sources of bacteria and potential activities to address each source [https://stormwater.pca.state.mn.us/index.php?title=Guidance_for_meeting_bacteria_TMDL_MS4_permit_requirements#Inventorying_potential_areas_and_sources_of_bacteria were discussed above]). A written plan could include information contained in the tables below (Strategies and actions proposed for the Coon Creek subwatershed; Priority Actions for Shingle Creek Subwatershed).
  
===Prioritize any human sources of bacteria first===
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Address human sources of bacteria first since they represent a clear human public health risk (e.g. failing septic systems, illicit discharges, etc.). Streams that exceed the [https://www.revisor.mn.gov/rules/7050/ State water quality standards] for ''E. coli'' may have increased levels of waterborne pathogens that can be harmful to human health when the streams are used as drinking waters sources and for recreational activities. It is also important to prioritize implementation activities that reduce bacteria to impaired waters that people use for drinking and/or recreating (fishing, swimming, boating, etc.).
Address human sources of bacteria first since they represent a clear human public health risk (e.g. failing septic systems, illicit discharges, etc.). Streams that exceed the [https://www.revisor.mn.gov/rules/7050/ State water quality standards] for ''E. coli'' may have increased levels of waterborne pathogens that can be harmful to human health when the streams are used as drinking waters sources and for recreation activities. It is also important to prioritize implementation activities that reduce bacteria to impaired waters that people use for drinking and/or recreating (fishing, swimming, boating, etc.).
 
  
===Potential plan elements and examples===
 
 
The following elements may be included for each implementation activity when developing a written plan.
 
The following elements may be included for each implementation activity when developing a written plan.
:#Priority level
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:#Priority level (high, medium, low)
:#Cost estimates
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:#Cost estimates (staff time, construction and operation and maintenance costs).
:#Schedule  
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:#Schedule (target year for completion, duration)
:#Scale
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:#Scale (estimated magnitude in watershed, estimated scale of adoption. See tables below.)
:#Funding options
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:#Funding options (grants, stormwater utility fee, etc.)
:#Potential partners
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:#Potential partners (watershed management organizations, soil and water conservation districts, cities, townships, counties, etc.)
  
Information for identifying potential implementation activities to reduce bacteria in the impaired watershed may be available in the following.
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Information for identifying potential sources of bacteria and possible implementation activities to reduce bacteria in the impaired watershed may be available in the following.
 
*[https://www.pca.state.mn.us/water/total-maximum-daily-load-tmdl-projects TMDL Reports]
 
*[https://www.pca.state.mn.us/water/total-maximum-daily-load-tmdl-projects TMDL Reports]
 
*TMDL <span title="a plan that specifies the type and quantity of corrective measures needed to achieve the pollutant loads calculated in a TMDL and implementing those plans will help to achieve that goal."> '''Implementation Plans'''</span>
 
*TMDL <span title="a plan that specifies the type and quantity of corrective measures needed to achieve the pollutant loads calculated in a TMDL and implementing those plans will help to achieve that goal."> '''Implementation Plans'''</span>
*[https://www.pca.state.mn.us/featured/wraps-prescriptions-healthy-lakes-and-streams Watershed Restoration and Protection Strategies Reports]
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*[https://www.pca.state.mn.us/water/total-maximum-daily-load-tmdl-projects Watershed Restoration and Protection Strategies Reports]
 
*Local water plans (e.g., Watershed Management Organizations, Watershed Districts, Soil and Watershed Districts, Conservation Districts, County, City, and One Watershed One Plans)
 
*Local water plans (e.g., Watershed Management Organizations, Watershed Districts, Soil and Watershed Districts, Conservation Districts, County, City, and One Watershed One Plans)
 
*[https://www.health.state.mn.us/communities/environment/water/cwf/dwpcwf.html Source Water Protection Plans]
 
*[https://www.health.state.mn.us/communities/environment/water/cwf/dwpcwf.html Source Water Protection Plans]
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==Related pages==
 
==Related pages==
 
'''TMDL MS4 permit guidance'''
 
'''TMDL MS4 permit guidance'''
*[[Forms, guidance, and resources for completing the TMDL annual report form]]
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*[[Guidance for meeting chloride TMDL MS4 permit requirements]]
*Chloride
 
 
*[[Guidance for meeting bacteria TMDL MS4 permit requirements]]
 
*[[Guidance for meeting bacteria TMDL MS4 permit requirements]]
 
*[[Guidance for meeting dissolved oxygen or oxygen demand TMDL MS4 permit requirements]]
 
*[[Guidance for meeting dissolved oxygen or oxygen demand TMDL MS4 permit requirements]]
 
*[[Guidance for meeting temperature TMDL MS4 permit requirements]]
 
*[[Guidance for meeting temperature TMDL MS4 permit requirements]]
*nitrogen
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*[[Guidance for categorical TMDLs]]
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*[[Forms, guidance, and resources for completing the TMDL annual report form]]
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*[[Baseline year]]
 
*[[Summary of TMDL requirements in stormwater permits]]
 
*[[Summary of TMDL requirements in stormwater permits]]
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*[[Interpreting wasteload allocations based on flow/load duration curves]]
  
 
'''TMDL toolkit for MS4 permit compliance'''
 
'''TMDL toolkit for MS4 permit compliance'''
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*[http://www.pca.state.mn.us/index.php/view-document.html?gid=19465 Addressing TMDL Requirements in MS4 General Permit Applications and Stormwater Pollution Prevention Program Documents]
 
*[http://www.pca.state.mn.us/index.php/view-document.html?gid=19465 Addressing TMDL Requirements in MS4 General Permit Applications and Stormwater Pollution Prevention Program Documents]
 
*[http://www.pca.state.mn.us/index.php/view-document.html?gid=19456 List of approved TMDLs with MS4 Wasteload Allocations]
 
*[http://www.pca.state.mn.us/index.php/view-document.html?gid=19456 List of approved TMDLs with MS4 Wasteload Allocations]
*[[MPCA guidance for setting wasteload allocations for regulated stormwater]]
 
 
*[[Technical guidance used by MPCA to develop guidelines for setting TMDL WLAs for regulated stormwater]]
 
*[[Technical guidance used by MPCA to develop guidelines for setting TMDL WLAs for regulated stormwater]]
 
*[[Case studies for regulated stormwater issues]]
 
*[[Case studies for regulated stormwater issues]]
 
*[[Guidance on what discharges should be included in the TMDL wasteload allocation for MS4 stormwater]]
 
*[[Guidance on what discharges should be included in the TMDL wasteload allocation for MS4 stormwater]]
*[[Fact sheet on what discharges should be included in the TMDL wasteload allocation for MS4 stormwater]]
 
*[[Guidance for addressing large watershed TMDL studies]]
 
*[[Guidance for developing TMDL implementation plans for MS4 stormwater]]
 
*[[Fact sheet for developing TMDL implementation plans for permitted MS4 stormwater]]
 
 
*[[File:Guidance on What Discharges Should be Included in the TMDL Wasteload Allocation for MS4 Stormwater.docx|Guidance on What Discharges Should be Included in the TMDL Wasteload Allocation for MS4 Stormwater]] - August 2010
 
*[[File:Guidance on What Discharges Should be Included in the TMDL Wasteload Allocation for MS4 Stormwater.docx|Guidance on What Discharges Should be Included in the TMDL Wasteload Allocation for MS4 Stormwater]] - August 2010
 
*[[Construction activity by county]]
 
*[[Construction activity by county]]
  
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[[Category:Level 2 - Pollutants/Bacteria and pathogens]]
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[[Category:Level 3 - Regulatory/Municipal (MS4)/TMDLs]]
 
</noinclude>
 
</noinclude>

Latest revision as of 15:22, 3 December 2022

image
image of bacteria impairments
Map showing 2018 U.S. EPA-approved stream and river stretches impaired for either e coli or fecal coliforms.

This page provides guidance for MS4 (Municipal Separate Storm Sewer System) permittees who have total maximum daily load (TMDLs) wasteload allocations (WLAs) for bacteria.

For more information on bacteria in stormwater, link here. For more information on pathogens in urban stormwater link here.

Bacteria TMDLs

Escherichia (E). coli is an indicator bacteria, meaning it indicates the potential presence of disease causing pathogens that can be harmful to human health. Currently there are 172 impaired waters that have total maximum daily load (TMDLs) that include MS4 (Municipal Separate Storm Sewer System) wasteload allocations (WLAs) for bacteria. Click here to link to MPCA's impaired waters website. The adjoining map illustrates U.S. EPA-approved listings for E. coli and fecal coliform.

Permit requirements for bacteria TMDLs

MS4 permit requirements for permittees that have an applicable wasteload allocation (WLA) for bacteria include the following:

Section 22.3: If the permittee has an applicable WLA where a reduction in pollutant loading is required for bacteria, the permittee must maintain a written or mapped inventory of potential areas and sources of bacteria (e.g., dense populations of waterfowl or other bird, dog parks).

Section 22.4: If the permittee has an applicable WLA where a reduction in pollutant loading is required for bacteria, the permittee must maintain a written plan to prioritize reduction activities to address the areas and sources identified in the inventory in item 22.3. The written plan must include BMPs the permittee will implement over the permit term, which may include, but is not limited to:
a. water quality monitoring to determine areas of high bacteria loading;
b. installation of pet waste pick-up bags in parks and open spaces;
c. elimination of over-spray irrigation that may occur at permittee owned/operated areas;
d. removal of organic matter via street sweeping;
e. implementation of infiltration structural stormwater BMPs; or
f. management of areas that attract dense populations of waterfowl (e.g., riparian plantings).

Information: The MPCA, working with stakeholders, developed a checklist for conducting an inventory of bacteria sources. The checklist is not a permit requirement but may be used to meet permit requirements 22.3 and 22.4.

Guidance for meeting bacteria TMDL permit requirements

The MS4 permit employs a performance based approach for meeting bacteria TMDLs. This means that permittees must perform certain actions intended to reduce bacteria loads from stormwater runoff rather than quantify loads or load reductions associated with implementation of best management practices (BMPs).

Inventorying potential areas and sources of bacteria

Section 22.3: If the permittee has an applicable WLA for bacteria, the permittee must maintain a written or mapped inventory of potential areas and sources of bacteria (e.g., dense populations of waterfowl or other bird, dog parks).

The purpose of this permit requirement is to identify areas that may contribute significant bacteria loads to stormwater runoff and receiving waters. Bacteria are ubiquitous and there are many potential sources in urban areas. Common sources for bacteria include sanitary sewer overflow locations, areas that attract nuisance birds and/or wildlife (parks, golf courses, etc.), dog parks, and known septic systems (see adjoining table for additional potential sources). The intention of this permit requirement is to identify areas where bacteria loading may be particularly high so that permittees can implement activities to reduce or eliminate the bacteria source.

The adjoining table and a section in the manual, Stormwater management for bacteria, may be helpful in identifying areas for inventoring and mapping.

Potential sources of bacteria and actions to address
Link to this table

General Category Source Action
Municipal Sanitary Infrastructure Combined Sewer Overflows1 Replace infrastructure, if possible
Sanitary Sewer Bypasses/Overflows Line sanitary sewer pipes
Inflow and Infiltration Minimize and eliminate through repairing damaged sewers
Illicit discharges from unsewered communities Detect and eliminate illicit discharges
Human Sanitary Sources Leaky/failing septic systems Update and enforce subsurface sewage treatment system (SSTS) ordinances
Educate homeowners on septic system maintenance and opportunities for replacement
Implement higher standards for setbacks for installing septic systems near receiving water bodies
Porta-potties Ensure construction site temporary toilets have appropriate pollution prevention BMPs
Domestic pets Dogs, cats, dog parks, walking trails, residential yard and sidewalk runoff (spring runoff after winter accumulation) Establish pet waste disposal stations along trails, in dog parks, etc.
Pass and enforce pet waste ordinances and educate pet owners about them
Add infiltration BMPs downstream of parks/residential areas and upstream of stormwater pipes (i.e., somewhere between the park/residential area and the stormwater outfall so as to intercept and infiltrate some or all of the flow from these areas)
Reduce transport from parks, residential, and other areas by the use of buffer zones and other disconnection of flow pathways (e.g. impervious surface, disconnection, downspout disconnection)
Urban wildlife Rodents (raccoons, squirrels, etc.), deer, etc., birds (geese, ducks, swallows, etc.), areas where wildlife congregate such as fields, parks, and golf courses Wildlife feeding bans and control of nuisance populations, including ducks and geese and other wildlife
Remove community facilities such as vending machines for feeding ducks and geese
Add buffers in riparian zones near waterbodies to deter waterfowl congregation
Consider wildlife barriers if wildlife (e.g. raccoons) are found to be living in storm sewers
When possible, use infiltration BMPs instead of detention ponds in residential developments and other areas where wildlife may congregate
Other Urban Sources (non-stormwater) Excessive irrigation/overspray Assess the extent to which irrigation over-spray occurs at city-owned facilities and eliminate overspray as appropriate
Education on water conservation
MS4 Infrastructure Illicit sanitary connections to MS4 Detect and eliminate illicit discharges
Leaky sewer pipes Line sewer pipes
Biofilms/regrowth Reduce dry weather flows, which provide conditions that promote bacteria growth. Dry weather flows could be from night time irrigation of lawns/parks or leaky stormsewer pipes.
Decaying plant matter, litter, and sediment in the storm drain system Enhance street sweeping program.
Prevent the discharge of grit chamber clean out effluent
Remove leaf litter and soil in street and gutters: implement an Adopt-a-storm drain program
Other Natural Sources Stream Bank Erosion Streambank restoration

1Note only a few combined sewers remain in Minneapolis
*This table was created using information from the Upper Mississippi River Bacteria TMDL Study (2014) and Protection Plan and the Upper Mississippi River Bacteria TMDL Implementation Plan (2016), Pathogens in Urban Stormwater Systems (2014), and the Minnehaha Creek Bacterial Source Identification Study (2017).


Vermillion TMDL Implemenation Table
Table from the Vermillion River Watershed TMDL report showing potential sources of bacteria in each impaired watershed. Click on image to enlarge.
Bacteria map
Map showing potential sources of bacteria in an impaired watershed.

Many TMDL reports contain information on potential sources and relative contributions of sources in the TMDL impaired subwatershed. For example, the Vermillion River Watershed TMDL Report (2015) includes the adjoining table that shows potential sources of bacteria in each impaired reach. These reports may provide specific sources to the impaired water, although most TMDL reports provide general information about bacteria sources.

You may also choose to create a mapped, rather than written, inventory of potential sources of bacteria. This could be done using Geographic Information System (GIS) to show areas where there may be potentially high levels of bacteria. A hypothetical example is shown in the adjacent image. Note that the map shows the subwatershed area of the impaired reach outlined in blue and the jurisdictional boundary outlined in black. The sources indicated on the map include subsurface sewage treatment system (SSTS), sanitary sewers, and dog parks. In this hypothetical example the MS4 permittee (Municipal Separate Storm Sewer System) may choose to focus their initial implementation efforts on working with residents to update any non-compliant septic systems, detecting and eliminating any illicit discharges from sanitary sewers, and implementing an education campaign focused on dog park users.

You may also want to consider further activities to determine potential sources of bacteria. Some voluntary activities may include the following.

  1. Conduct an E. coli monitoring study along the impaired stream to help identify hot spots of higher bacteria concentrations. Monitor the tributaries flowing into the stream and consider monitoring stormwater outfalls. Sampling at the correct times is critical if this approach is utilized. See bacteria monitoring guidance for more information.
  2. Identify subwatersheds for each stormwater outfall or tributary to the impaired stream, making note of potential high-loading features such as wildlife congregation areas, parks (especially dog parks) and sanitary systems that are potentially located upstream of stormwater systems. Stormwater outfall monitoring could be targeted based on the results from the written and/or mapped inventory.
  3. Visually inspect stormwater outfalls to the impaired stream during dry weather flow for flows, odor, color, condition, etc. that would be indicative of an illicit discharge. Take the appropriate actions to eliminate the illicit discharge.

Maintain a written plan to prioritize reduction activities

Section 22.4: If the permittee has an applicable WLA for bacteria, the permittee must maintain a written plan to prioritize reduction activities to address the areas and sources identified in the inventory in item 22.3. The written plan must include BMPs the permittee will implement over the permit term, which may include, but is not limited to:
a. water quality monitoring to determine areas of high bacteria loading;
b. installation of pet waste pick-up bags in parks and open spaces;
c. elimination of over-spray irrigation that may occur at permittee owned/operated areas;
d. removal of organic matter via street sweeping;
e. implementation of infiltration structural stormwater BMPs; or
f. management of areas that attract dense populations of waterfowl (e.g., riparian plantings).

MS4s with a bacteria WLA are required to develop and maintain a written plan to prioritize reduction activities to address bacteria. Potential sources of bacteria and potential activities to address each source were discussed above). A written plan could include information contained in the tables below (Strategies and actions proposed for the Coon Creek subwatershed; Priority Actions for Shingle Creek Subwatershed).

Address human sources of bacteria first since they represent a clear human public health risk (e.g. failing septic systems, illicit discharges, etc.). Streams that exceed the State water quality standards for E. coli may have increased levels of waterborne pathogens that can be harmful to human health when the streams are used as drinking waters sources and for recreational activities. It is also important to prioritize implementation activities that reduce bacteria to impaired waters that people use for drinking and/or recreating (fishing, swimming, boating, etc.).

The following elements may be included for each implementation activity when developing a written plan.

  1. Priority level (high, medium, low)
  2. Cost estimates (staff time, construction and operation and maintenance costs).
  3. Schedule (target year for completion, duration)
  4. Scale (estimated magnitude in watershed, estimated scale of adoption. See tables below.)
  5. Funding options (grants, stormwater utility fee, etc.)
  6. Potential partners (watershed management organizations, soil and water conservation districts, cities, townships, counties, etc.)

Information for identifying potential sources of bacteria and possible implementation activities to reduce bacteria in the impaired watershed may be available in the following.

For example, the Coon Creek Watershed District Watershed Restoration and Protection Strategies Report (2016) includes the following implementation table that could be used to inform the written plan:

Strategies and actions proposed for the Coon Creek subwatershed (See Table 10 of the report).
Link to this table.

Strategies Strategy types and estimated scale of adoption needed to meet final water quality target Interim 10-year milestone Partners
Address failing septic systems ID and upgrade all ITPHS systems ID process/upgrades complete Watershed District, Cities, County
ID and upgrade all non-compliant SSTS near surface water resources ID process complete Watershed District, Cities, County
Improve upland/field surface runoff controls Identify areas in need of riparian buffers; install/enhance 15-25 foot buffers where practical Year 2: identify high priority areas; Year 10: 20% of buffers completed Watershed District, Cities, Soil and Water Conservation District
Pet waste management Provide outreach and education materials to residents regarding appropriate pet waste management Increased public awareness Watershed District, Cities, Soil and Water Conservation District
Ordinance enforcement Ongoing Watershed District, Cities
New/emerging technologies Follow new and emerging technologies (e.g. biochar, etc.) Install 2 projects/devices aimed to reduce E. coli Watershed District, Cities

The Upper Mississippi River Bacteria TMDL Implementation Strategy report (2016) includes the information in the adjoining table that could be used to inform the written plan.

Priority Actions for Shingle Creek Subwatershed (Table 66).
Link to this table.

Priority Timeframe1 Action Estimated Effectiveness of Practice2 (up to) Estimated Magnitude in Watershed Implementation Cost3
High Identify and map potential bacteria hotspots Staff time
High Update and enforce pet waste ordinances ~23,000 acres developed land but target near stream first Staff time
High Conduct public outreach to ensure that pet owners pick up pet waste and comply with pet waste ordinances Staff time
High Direct flow pathways between contributing areas to infiltration/treatment basins or away from impervious areas to prevent direct pathway to receiving waters
High Develop, implement, and enforce a program to detect and eliminate illicit discharges
High Inspect/monitor stormwater outfalls to reduce dry weather flow Staff time
Medium Install Filtration/Biofiltration BMPs where feasible 35% $8,000-20,000/ac
Low Install filter strips/buffers near waterbodies to deter waterfowl from congregating and conduct public outreach on wildlife feeding 91% ~53 acres (assume 11 miles of stream; 20ft buffer) $600-1,000/acre of buffer
Low Conduct septic system inspections as warranted and bring all imminent threat to public health septic systems into compliance with ordinances 100% ~22 systems $200-300 (inspection) $7,500 per system (if replacement required)

1Priority is based on recommended timeframe to continue or start (not complete) implementation activities: High = 1-2 years, Medium = 2-5 years, Low = 5-10 years
2Estimated effectiveness of practice refers to the reduction of bacteria concentrations in runoff to receiving waterbodies
3Costs based on NRCS EQIP Payment Schedules

References

  • Minnesota Pollution Control Agency (MPCA). 2014. Upper Mississippi River Bacteria TMDL Study and Protection Plan. wq-iw8-08e. Prepared by Minnesota Pollution Control Agency and Emmons and Olivier Resources, Inc.
  • Minnesota Pollution Control Agency (MPCA). 2016. Upper Mississippi River Bacteria TMDL Implementation Plan. Prepared by Minnesota Pollution Control Agency and Emmons and Olivier Resources, Inc.
  • Sadowsky, M., C. Staley, and S. Gruber. 2017. Minnehaha Creek Bacterial Source Identification Study—Sources of E. Coli in an Urban Environment. Presentation at Minnesota Water Resources Conference, St. Paul, MN. October 18, 2017.
  • Urban Water Resources Research Council. 2014. Pathogens in Urban Stormwater Systems. Prepared by Urban Water Resources Research Council Pathogens in Wet Weather Flows Technical Committee, Environmental and Water Resources Institute, American Society of Civil Engineers


Related pages

TMDL MS4 permit guidance

TMDL toolkit for MS4 permit compliance

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Access a quick guide for using models to meet MS4 TMDL requirements

TMDL guidance and general information

This page was last edited on 3 December 2022, at 15:22.